10X Single Cell RNA Sequencing Service

SeqMatic accepts customer prepared 10X single cell 3′ and 5′ RNA libraries for sequencing. Our streamlined service has been specially optimized to meet the needs of this unique library type.

Service Highlights

Scalable Sequencing Solutions

  • We offer flexible options on the NextSeq, HiSeq, or NovaSeq to accommodate projects of any size

Expert Service

  • Our team of experts understand the unique challenges associated with single cell RNA sequencing

CellRanger Data Analysis

  • Customized FASTQ demultiplexing is included for all orders.
  • Sequence alignment and aggregate analysis also available.

Recommended Run Types:

Sequencing Platform Read Count Read Length
NovaSeq S1 Up to 1600M

(800M per lane)

Read 1 (Cell barcode & UMI): 26bp
Read 2 (Transcript): 91bp
Sample Index: 8bp
NovaSeq S2 Up to 4100M

(2050M per lane)

NovaSeq S4 Up to 10000M

(2500M per lane)

HiSeq 4000 Up to 2500M

(320M per lane)

Read 1 (Cell barcode & UMI): 26bp
Read 2 (Transcript): 98bp
Sample Index: 8bp
NextSeq 500 Up to 400M

Additional Information

All trademarks are property of their registered owners. SeqMatic LLC is not affiliated, associated, or endorsed by 10X Genomics, Inc