Metagenomic Microbiome Analysis Services
Microbiome Characterization within your sample
Metagenomics microbiome analysis services play a vital role in research by offering an in-depth look at the microbial communities within samples. This approach enables scientists to pinpoint various species present and understand their potential roles, including contributions from microbes that are hard to culture using traditional techniques. As a result, metagenomics provides a more nuanced insight into the intricate world of microbial ecosystems. This knowledge is valuable across diverse fields, from advancing our understanding of human health and environmental science to improving agricultural practices.
SeqMatic’s metagenomics services provide the highest quality extraction, library preparation and sequencing data for all genomes present. A wide range of analyses can be conducted including de novo assembly, reference genome mapping, genome annotation, and SNP identification.
Our laboratory offers Shotgun, 16S, 18S, ITS Metagenomics, as well as Metatranscriptomics.
Service Highlights:
- Comprehensive service: We offer extraction, library generation, sequencing, and data analysis services.
- Prepare libraries from diverse and difficult samples: We have experience working with samples such as: soil, water, stool, blood, guts, plant, skin, culture, etc. We are able to capture GC rich and repetitive genomes within your sample.
- High Quality Library Generation: All libraries are size selected to optimize fragment size, yielding consistent sequencing and optimal sample coverage.
- Stringent Quality Controls: All samples are validated to ensure high quality sequencing data
- State of the Art Technology: Illumina MiSeq, NextSeq and NovaSeq platforms provide read lengths up to 2x300bp
| Extraction | Library Preparation | Sequencing | Data Analysis |
| We have experience mitigating secondary metabolites and contaminants that may interfere with downstream sequencing. | Libraries are generated using Amplicon, Custom Primers, TruSeq or Nextera protocols and include a unique barcode sequence. All libraries are verified for quality and yield. | Sequencing is performed using Illumina platforms. Up to 384 barcoded samples can be pooled into a single run. | Sequences can be aligned to reference genomes or assembled into contigs. All raw and processed data is delivered to the customer. |
“SeqMatic exhibits the best in sequencing performance, customer service, and turnaround. My experience in getting several runs completed was an absolute pleasure, and I would recommend SeqMatic to anyone with sequencing needs!”
Customer F.G.
San Francisco, CA
Al Rwahnih, et al. “First report of Grapevine Pinot gris virus infecting Grapevine in the United States.” Plant Disease ja (2015).
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