Illumina NovaSeq 6000 Sequencing Services
Fast, Reliable and High-Quality Next Generation Sequencing
Illumina NovaSeq sequencing services require a trusted partner with proven expertise. As a certified service provider (CSP) for over a decade, SeqMatic stands at the forefront of genomic analysis. Our deep understanding of Illumina’s sophisticated chemistry and advanced sequencing platforms ensures reliable, high-quality results for every project.
The NovaSeq 6000 system performs Whole-Genome, Whole-Exome and Whole-Transcriptome sequencing. Its tunable output generates up to 8 Tb and 24B single reads in dual flow cell mode with streamlined workflows.
Service Highlights:
- All services performed in the USA at our facility in Fremont, California.
- 1-2 week turnaround for all run types; 5 day guaranteed Express Services available
- PhiX spike-in included
- Single or dual index reads for no additional charge
- Custom primers are supported for no additional charge
- Free demultiplexing (FASTQ) and S3 data transfer
HIDDEN
HIDDEN
SP Run Types per flow cell:
| Read Length | Indexing Read | Read Count | Data Output |
| 1 x 100bp or 2 x 50bp | Single or Dual Indexing | Up to 1B Reads | Up to 100Gbp |
| 2 x 100bp | Single or Dual Indexing | Up to 1B Reads | Up to 200Gbp |
| 2 x 150bp | Single or Dual Indexing | Up to 1B Reads | Up to 300Gbp |
| 2 x 250bp | Single or Dual Indexing | Up to 1B Reads | Up to 400Gbp |
S1 Run Types per flow cell:
| Read Length | Indexing Read | Read Count | Data Output |
| 1 x 100bp or 2 x 50bp | Single or Dual Indexing | Up to 2B Reads | Up to 175Gbp |
| 2 x 100bp | Single or Dual Indexing | Up to 2B Reads | Up to 350Gbp |
| 2 x 150bp | Single or Dual Indexing | Up to 2B Reads | Up to 500Gbp |
S2 Run Types per flow cell
| Read Length | Indexing Read | Read Count | Data Output |
| 1 x 100bp or 2 x 50bp | Single or Dual Indexing | Up to 4B Reads | Up to 350Gbp |
| 2 x 100bp | Single or Dual Indexing | Up to 4B Reads | Up to 700Gbp |
| 2 x 150bp | Single or Dual Indexing | Up to 4B Reads | Up to 1200Gbp |
S4 Run Types per flow cell:
| Read Length | Indexing Read | Read Count | Data Output |
| 2 x 100bp | Single or Dual Indexing | Up to 12B Reads | Up to 3000Gbp |
| 2 x 150bp | Single or Dual Indexing | Up to 12B Reads | Up to 4000Gbp |
| Illumina Specification (# of reads expected) VS. SeqMatic (# of reads generated) | ||
| ||
![]() |
“SeqMatic exhibits the best in sequencing performance, customer service, and turnaround. My experience in getting several runs completed was an absolute pleasure, and I would recommend SeqMatic to anyone with sequencing needs!”
Customer F.G.
San Francisco, CA
Haddock, Naomi L., et al. “Phage diversity in cell-free DNA identifies bacterial pathogens in human sepsis cases.” Nature Microbiology (2023): 1-13.
Xia, Dan, et al. “Novel App knock-in mouse model shows key features of amyloid pathology and reveals profound metabolic dysregulation of microglia.” Molecular Neurodegeneration 17.1 (2022): 41.
Crespo-Garcia, Sergio, et al. “Pathological angiogenesis in retinopathy engages cellular senescence and is amenable to therapeutic elimination via BCL-xL inhibition.” Cell Metabolism 33.4 (2021): 818-832.
Aldinger, Kimberly A., et al. “Spatial and cell type transcriptional landscape of human cerebellar development.” Nature Neuroscience 24.8 (2021): 1163-1175.
Find other Research Publications from around the world!

